BindingFeature bindsTo
Boolean intramolecular
Conversion stepConversion
StepDirection stepDirection
Set<E> stepProcess
org.apache.commons.logging.Log log
CellVocabulary celltype
TissueVocabulary tissue
CatalysisDirectionType catalysisDirection
Set<E> cofactor
float ionicStrength
float ph
float pMg
float temperature
StructureFormatType structureFormat
String structureData
SequenceModificationVocabulary modificationType
float deltaGPrime0
org.apache.commons.logging.Log LOG
Set<E> evidence
EntityReference ownerEntityReference
Set<E> featureOf
Set<E> notFeatureOf
SequenceLocation featureLocation
Set<E> memberFeature
SequenceRegionVocabulary featureLocationType
Set<E> memberFeatureOf
Set<E> participantOf
Set<E> availability
Set<E> dataSource
Set<E> evidence
BioSource organism
PhenotypeVocabulary phenotype
Score interactionScore
float kPrime
SequenceModificationVocabulary modificationType
SequenceLocation absoluteRegion
Set<E> regionType
NucleicAcidReference containerEntityReference
Set<E> subRegionOf
String patoData
CellularLocationVocabulary cellularLocation
Set<E> memberPhysicalEntity
Set<E> componentOf
Set<E> feature
Set<E> notFeature
Set<E> controllerOf
org.apache.commons.logging.Log log
Set<E> memberPhysicalEntityOf
RelationshipTypeVocabulary relationshipType
RnaRegionReference rnaRegionReference
SequenceLocation sequenceLocation
String value
Provenance scoreSource
SequenceSite sequenceIntervalBegin
SequenceSite sequenceIntervalEnd
PositionStatusType positionStatus
int sequencePosition
EntityReference entityReference
org.apache.commons.logging.Log log
String chemicalFormula
float molecularWeight
ChemicalStructure structure
float stoichiometricCoefficient
PhysicalEntity physicalEntity
Set<E> product
NucleicAcid template
TemplateDirectionType templateDirection
Set<E> members
Set<E> subgroups
boolean isComplex
Class<T> genericClass
Set<E> sources
GroupMap groupMap
Miner[] miners
JRadioButton pcRadio
JRadioButton customFileRadio
JRadioButton customURLRadio
JTextField modelField
JTextField urlField
JButton loadButton
JComboBox<E> pcCombo
JComboBox<E> patternCombo
JTextArea descArea
JTextField outputField
JButton runButton
JLabel prgLabel
JProgressBar prgBar
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