public class InteractionSetL3 extends InteractionSet
Constructor and Description |
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InteractionSetL3(Model model)
Constructor with the model.
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Modifier and Type | Method and Description |
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void |
convertGroupsToInteractions()
Creates membership links between group nodes and members in the generated SIF graph.
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void |
expandGroups()
This method iteratively replaces groups with BioPAX elements
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GroupMap |
getGroupMap()
Getter for the groupMap
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add
access
clear, clone, contains, isEmpty, iterator, remove, size, spliterator
equals, hashCode, removeAll
addAll, containsAll, retainAll, toArray, toArray, toString
finalize, getClass, notify, notifyAll, wait, wait, wait
addAll, containsAll, equals, hashCode, removeAll, retainAll, toArray, toArray
parallelStream, removeIf, stream
public InteractionSetL3(Model model)
model
- model to mine binary interactionspublic GroupMap getGroupMap()
public void convertGroupsToInteractions()
public void expandGroups()
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