@Entity public abstract class ChemicalConstantImpl extends L3ElementImpl implements ChemicalConstant
FIELD_AVAILABILITY, FIELD_COMMENT, FIELD_DATASOURCE, FIELD_ECNUMBER, FIELD_KEYWORD, FIELD_NAME, FIELD_ORGANISM, FIELD_PATHWAY, FIELD_SEQUENCE, FIELD_TERM, FIELD_XREFDB, FIELD_XREFID, FILTER_BY_DATASOURCE, FILTER_BY_ORGANISM
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Constructor and Description |
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ChemicalConstantImpl() |
Modifier and Type | Method and Description |
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int |
equivalenceCode()
If two elements are equivalent, then their equivalence code should be the
same.
|
float |
getIonicStrength()
The ionic strength is defined as half of the total sum of the concentration (ci) of every ionic species (i)
in the solution times the square of its charge (zi).
|
Class<? extends ChemicalConstant> |
getModelInterface()
This method returns the actual model interface that a class implements.
|
float |
getPh()
A measure of acidity and alkalinity of a solution that is a number on a scale on which a value of 7
represents neutrality and lower numbers indicate increasing acidity and higher numbers increasing alkalinity
and on which each unit of change represents a tenfold change in acidity or alkalinity and that is the
negative logarithm of the effective hydrogen-ion concentration or hydrogen-ion activity in gram equivalents
per liter of the solution.
|
float |
getPMg() |
float |
getTemperature() |
protected boolean |
semanticallyEquivalent(BioPAXElement element) |
void |
setIonicStrength(float ionicStrength)
The ionic strength is defined as half of the total sum of the concentration (ci) of every ionic species (i)
in the solution times the square of its charge (zi).
|
void |
setPh(float ph)
A measure of acidity and alkalinity of a solution that is a number on a scale on which a value of 7
represents neutrality and lower numbers indicate increasing acidity and higher numbers increasing alkalinity
and on which each unit of change represents a tenfold change in acidity or alkalinity and that is the
negative logarithm of the effective hydrogen-ion concentration or hydrogen-ion activity in gram equivalents
per liter of the solution.
|
void |
setPMg(float pMg) |
void |
setTemperature(float temperature) |
addComment, getComment, getDatasources, getKeywords, getOrganisms, getParentPathways, removeComment, setComment
equals, getAnnotations, getPk, getRDFId, hashCode, isEquivalent, toString
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
addComment, getComment, removeComment
getAnnotations, getRDFId, isEquivalent
public ChemicalConstantImpl()
public float getIonicStrength()
ChemicalConstant
getIonicStrength
in interface ChemicalConstant
public void setIonicStrength(float ionicStrength)
ChemicalConstant
setIonicStrength
in interface ChemicalConstant
ionicStrength
- The ionic strengthpublic float getPh()
ChemicalConstant
getPh
in interface ChemicalConstant
public void setPh(float ph)
ChemicalConstant
setPh
in interface ChemicalConstant
ph
- A measure of acidity and alkalinity of a solutionpublic float getPMg()
getPMg
in interface ChemicalConstant
public void setPMg(float pMg)
setPMg
in interface ChemicalConstant
pMg
- A measure of the concentration of magnesium (Mg) in solution. (pMg =
-log10[Mg2+])public float getTemperature()
getTemperature
in interface ChemicalConstant
public void setTemperature(float temperature)
setTemperature
in interface ChemicalConstant
temperature
- Temperature in Celsiuspublic Class<? extends ChemicalConstant> getModelInterface()
BioPAXElement
getModelInterface
in interface BioPAXElement
org.biopax.paxtools.model
package
corresponding to a BioPAX class.protected boolean semanticallyEquivalent(BioPAXElement element)
semanticallyEquivalent
in class BioPAXElementImpl
public int equivalenceCode()
BioPAXElement
equivalenceCode
in interface BioPAXElement
equivalenceCode
in class BioPAXElementImpl
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