@Entity @Indexed public class GeneticInteractionImpl extends InteractionImpl implements GeneticInteraction
FIELD_AVAILABILITY, FIELD_COMMENT, FIELD_DATASOURCE, FIELD_ECNUMBER, FIELD_KEYWORD, FIELD_NAME, FIELD_ORGANISM, FIELD_PATHWAY, FIELD_SEQUENCE, FIELD_TERM, FIELD_XREFDB, FIELD_XREFID, FILTER_BY_DATASOURCE, FILTER_BY_ORGANISM
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Constructor and Description |
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GeneticInteractionImpl() |
Modifier and Type | Method and Description |
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Score |
getInteractionScore() |
Class<? extends GeneticInteraction> |
getModelInterface()
This method returns the actual model interface that a class implements.
|
PhenotypeVocabulary |
getPhenotype() |
void |
setInteractionScore(Score interactionScore) |
void |
setPhenotype(PhenotypeVocabulary phenotype) |
addInteractionType, addParticipant, getInteractionType, getParticipant, removeInteractionType, removeParticipant, setInteractionType, setParticipant
getControlledOf, getPathwayComponentOf, getStepProcessOf, setControlledOf, setPathwayComponentOf, setStepProcessOf
addAvailability, addDataSource, addEvidence, getAvailability, getDataSource, getEvidence, getParticipantOf, removeAvailability, removeDataSource, removeEvidence, semanticallyEquivalent, setAvailability, setDataSource, setEvidence, setParticipantOf
addName, getDisplayName, getDisplayNameX, getName, getStandardName, getStandardNameX, removeName, setDisplayName, setDisplayNameX, setName, setStandardName, setStandardNameX
addXref, equivalenceCode, getXref, removeXref, setXref
addComment, getComment, getDatasources, getKeywords, getOrganisms, getParentPathways, removeComment, setComment
equals, getAnnotations, getPk, getRDFId, hashCode, isEquivalent, toString
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
addInteractionType, addParticipant, getInteractionType, getParticipant, removeInteractionType, removeParticipant
getControlledOf, getPathwayComponentOf, getStepProcessOf
addAvailability, addDataSource, getAvailability, getDataSource, getParticipantOf, removeAvailability, removeDataSource
addEvidence, getEvidence, removeEvidence
addName, getDisplayName, getName, getStandardName, removeName, setDisplayName, setName, setStandardName
addXref, getXref, removeXref
addComment, getComment, removeComment
equivalenceCode, getAnnotations, getRDFId, isEquivalent
public GeneticInteractionImpl()
public Class<? extends GeneticInteraction> getModelInterface()
BioPAXElement
getModelInterface
in interface BioPAXElement
getModelInterface
in class InteractionImpl
org.biopax.paxtools.model
package
corresponding to a BioPAX class.public PhenotypeVocabulary getPhenotype()
getPhenotype
in interface GeneticInteraction
public void setPhenotype(PhenotypeVocabulary phenotype)
setPhenotype
in interface GeneticInteraction
phenotype
- The phenotype quality used to define this genetic interaction e.g. viability.public Score getInteractionScore()
getInteractionScore
in interface GeneticInteraction
public void setInteractionScore(Score interactionScore)
setInteractionScore
in interface GeneticInteraction
interactionScore
- The score of an interaction e.g. a genetic interaction score.Copyright © 2015 BioPAX. All rights reserved.