@Entity @Indexed public class TemplateReactionImpl extends InteractionImpl implements TemplateReaction
FIELD_AVAILABILITY, FIELD_COMMENT, FIELD_DATASOURCE, FIELD_ECNUMBER, FIELD_KEYWORD, FIELD_NAME, FIELD_ORGANISM, FIELD_PATHWAY, FIELD_SEQUENCE, FIELD_TERM, FIELD_XREFDB, FIELD_XREFID, FILTER_BY_DATASOURCE, FILTER_BY_ORGANISM
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Constructor and Description |
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TemplateReactionImpl() |
Modifier and Type | Method and Description |
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void |
addProduct(PhysicalEntity product) |
Class<? extends TemplateReaction> |
getModelInterface()
This method returns the actual model interface that a class implements.
|
Set<PhysicalEntity> |
getProduct() |
NucleicAcid |
getTemplate() |
TemplateDirectionType |
getTemplateDirection() |
protected NucleicAcid |
getTemplateX() |
void |
removeProduct(PhysicalEntity product) |
protected void |
setProduct(Set<PhysicalEntity> product) |
void |
setTemplate(NucleicAcid template) |
void |
setTemplateDirection(TemplateDirectionType templateDirection) |
protected void |
setTemplateX(NucleicAcid template) |
addInteractionType, addParticipant, getInteractionType, getParticipant, removeInteractionType, removeParticipant, setInteractionType, setParticipant
getControlledOf, getPathwayComponentOf, getStepProcessOf, setControlledOf, setPathwayComponentOf, setStepProcessOf
addAvailability, addDataSource, addEvidence, getAvailability, getDataSource, getEvidence, getParticipantOf, removeAvailability, removeDataSource, removeEvidence, semanticallyEquivalent, setAvailability, setDataSource, setEvidence, setParticipantOf
addName, getDisplayName, getDisplayNameX, getName, getStandardName, getStandardNameX, removeName, setDisplayName, setDisplayNameX, setName, setStandardName, setStandardNameX
addXref, equivalenceCode, getXref, removeXref, setXref
addComment, getComment, getDatasources, getKeywords, getOrganisms, getParentPathways, removeComment, setComment
equals, getAnnotations, getPk, getRDFId, hashCode, isEquivalent, toString
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
addInteractionType, addParticipant, getInteractionType, getParticipant, removeInteractionType, removeParticipant
getControlledOf, getPathwayComponentOf, getStepProcessOf
addAvailability, addDataSource, getAvailability, getDataSource, getParticipantOf, removeAvailability, removeDataSource
addEvidence, getEvidence, removeEvidence
addName, getDisplayName, getName, getStandardName, removeName, setDisplayName, setName, setStandardName
addXref, getXref, removeXref
addComment, getComment, removeComment
equivalenceCode, getAnnotations, getRDFId, isEquivalent
public TemplateReactionImpl()
public Class<? extends TemplateReaction> getModelInterface()
BioPAXElement
getModelInterface
in interface BioPAXElement
getModelInterface
in class InteractionImpl
org.biopax.paxtools.model
package
corresponding to a BioPAX class.public Set<PhysicalEntity> getProduct()
getProduct
in interface TemplateReaction
protected void setProduct(Set<PhysicalEntity> product)
public void addProduct(PhysicalEntity product)
addProduct
in interface TemplateReaction
public void removeProduct(PhysicalEntity product)
removeProduct
in interface TemplateReaction
protected NucleicAcid getTemplateX()
protected void setTemplateX(NucleicAcid template)
public NucleicAcid getTemplate()
getTemplate
in interface TemplateReaction
public void setTemplate(NucleicAcid template)
setTemplate
in interface TemplateReaction
public TemplateDirectionType getTemplateDirection()
getTemplateDirection
in interface TemplateReaction
public void setTemplateDirection(TemplateDirectionType templateDirection)
setTemplateDirection
in interface TemplateReaction
Copyright © 2015 BioPAX. All rights reserved.