@Entity @Indexed public class SmallMoleculeReferenceImpl extends EntityReferenceImpl implements SmallMoleculeReference
FIELD_AVAILABILITY, FIELD_COMMENT, FIELD_DATASOURCE, FIELD_ECNUMBER, FIELD_KEYWORD, FIELD_NAME, FIELD_ORGANISM, FIELD_PATHWAY, FIELD_SEQUENCE, FIELD_TERM, FIELD_XREFDB, FIELD_XREFID, FILTER_BY_DATASOURCE, FILTER_BY_ORGANISM
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Constructor and Description |
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SmallMoleculeReferenceImpl() |
Modifier and Type | Method and Description |
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String |
getChemicalFormula() |
Class<? extends SmallMoleculeReference> |
getModelInterface()
This method returns the actual model interface that a class implements.
|
float |
getMolecularWeight() |
ChemicalStructure |
getStructure() |
protected boolean |
semanticallyEquivalent(BioPAXElement element) |
void |
setChemicalFormula(String formula) |
void |
setMolecularWeight(float molecularWeight) |
void |
setStructure(ChemicalStructure structure) |
addEntityFeature, addEntityReferenceType, addEvidence, addMemberEntityReference, getEntityFeature, getEntityReferenceOf, getEntityReferenceType, getEvidence, getMemberEntityReference, getMemberEntityReferenceOf, removeEntityFeature, removeEntityReferenceType, removeEvidence, removeMemberEntityReference, setEntityFeature, setEntityReferenceOf, setEntityReferenceType, setEvidence, setMemberEntity, setMemberEntityReference, setMemberEntityReferenceOf
addName, getDisplayName, getDisplayNameX, getName, getStandardName, getStandardNameX, removeName, setDisplayName, setDisplayNameX, setName, setStandardName, setStandardNameX
addXref, equivalenceCode, getXref, removeXref, setXref
addComment, getComment, getDatasources, getKeywords, getOrganisms, getParentPathways, removeComment, setComment
equals, getAnnotations, getPk, getRDFId, hashCode, isEquivalent, toString
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
addEntityFeature, addEntityReferenceType, addMemberEntityReference, getEntityFeature, getEntityReferenceOf, getEntityReferenceType, getMemberEntityReference, getMemberEntityReferenceOf, removeEntityFeature, removeEntityReferenceType, removeMemberEntityReference
addName, getDisplayName, getName, getStandardName, removeName, setDisplayName, setName, setStandardName
addXref, getXref, removeXref
addComment, getComment, removeComment
equivalenceCode, getAnnotations, getRDFId, isEquivalent
addEvidence, getEvidence, removeEvidence
public SmallMoleculeReferenceImpl()
public Class<? extends SmallMoleculeReference> getModelInterface()
BioPAXElement
getModelInterface
in interface BioPAXElement
getModelInterface
in class EntityReferenceImpl
org.biopax.paxtools.model
package
corresponding to a BioPAX class.@Field(name="keyword", store=YES, analyze=YES) @Boost(value=1.100000023841858f) public String getChemicalFormula()
getChemicalFormula
in interface SmallMoleculeReference
public void setChemicalFormula(String formula)
setChemicalFormula
in interface SmallMoleculeReference
public float getMolecularWeight()
getMolecularWeight
in interface SmallMoleculeReference
public void setMolecularWeight(float molecularWeight)
setMolecularWeight
in interface SmallMoleculeReference
public ChemicalStructure getStructure()
getStructure
in interface SmallMoleculeReference
public void setStructure(ChemicalStructure structure)
setStructure
in interface SmallMoleculeReference
protected boolean semanticallyEquivalent(BioPAXElement element)
semanticallyEquivalent
in class BioPAXElementImpl
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