@Entity @Indexed public class ProteinImpl extends SimplePhysicalEntityImpl implements Protein
FIELD_AVAILABILITY, FIELD_COMMENT, FIELD_DATASOURCE, FIELD_ECNUMBER, FIELD_KEYWORD, FIELD_NAME, FIELD_ORGANISM, FIELD_PATHWAY, FIELD_SEQUENCE, FIELD_TERM, FIELD_XREFDB, FIELD_XREFID, FILTER_BY_DATASOURCE, FILTER_BY_ORGANISM
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Constructor and Description |
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ProteinImpl() |
Modifier and Type | Method and Description |
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Class<? extends Protein> |
getModelInterface()
Overridden to provide better downcasting
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equivalenceCode, getEntityReference, getEntityReferenceX, getGenericEntityReferences, semanticallyEquivalent, setEntityReference, setEntityReferenceX
addFeature, addMemberPhysicalEntity, addNotFeature, getCellularLocation, getComponentOf, getControllerOf, getFeature, getMemberPhysicalEntity, getMemberPhysicalEntityOf, getNotFeature, hasEquivalentCellularLocation, hasEquivalentFeatures, locationAndFeatureCode, removeFeature, removeMemberPhysicalEntity, removeNotFeature, setCellularLocation, setComponentOf, setControllerOf, setFeature, setMemberPhysicalEntity, setMemberPhysicalEntityOf, setNotFeature
addAvailability, addDataSource, addEvidence, getAvailability, getDataSource, getEvidence, getParticipantOf, removeAvailability, removeDataSource, removeEvidence, setAvailability, setDataSource, setEvidence, setParticipantOf
addName, getDisplayName, getDisplayNameX, getName, getStandardName, getStandardNameX, removeName, setDisplayName, setDisplayNameX, setName, setStandardName, setStandardNameX
addXref, getXref, removeXref, setXref
addComment, getComment, getDatasources, getKeywords, getOrganisms, getParentPathways, removeComment, setComment
equals, getAnnotations, getPk, getRDFId, hashCode, isEquivalent, toString
clone, finalize, getClass, notify, notifyAll, wait, wait, wait
getEntityReference, getGenericEntityReferences, setEntityReference
addFeature, addMemberPhysicalEntity, addNotFeature, getCellularLocation, getComponentOf, getFeature, getMemberPhysicalEntity, getMemberPhysicalEntityOf, getNotFeature, hasEquivalentCellularLocation, hasEquivalentFeatures, removeFeature, removeMemberPhysicalEntity, removeNotFeature, setCellularLocation
getControllerOf
addAvailability, addDataSource, getAvailability, getDataSource, getParticipantOf, removeAvailability, removeDataSource
addEvidence, getEvidence, removeEvidence
addName, getDisplayName, getName, getStandardName, removeName, setDisplayName, setName, setStandardName
addXref, getXref, removeXref
addComment, getComment, removeComment
equivalenceCode, getAnnotations, getRDFId, isEquivalent
public ProteinImpl()
public Class<? extends Protein> getModelInterface()
PhysicalEntity
getModelInterface
in interface BioPAXElement
getModelInterface
in interface PhysicalEntity
getModelInterface
in class PhysicalEntityImpl
org.biopax.paxtools.model
package
corresponding to a BioPAX class.Copyright © 2015 BioPAX. All rights reserved.