Package | Description |
---|---|
org.biopax.paxtools.impl.level3 |
This package contains the default implementation for BioPAX Level 3.
|
org.biopax.paxtools.pattern.miner |
Package for pattern miner utility.
|
org.biopax.paxtools.pattern.util |
Package for several utility classes.
|
Modifier and Type | Class and Description |
---|---|
class |
SmallMoleculeReferenceImpl |
Modifier and Type | Method and Description |
---|---|
Class<? extends SmallMoleculeReference> |
SmallMoleculeReferenceImpl.getModelInterface() |
Modifier and Type | Method and Description |
---|---|
String |
MinerAdapter.getCompoundName(SmallMoleculeReference smr)
Gets the name of the small molecule to use in SIF.
|
Modifier and Type | Method and Description |
---|---|
String |
ChemicalNameNormalizer.getName(SmallMoleculeReference smr)
Gets the standard name of the small molecule.
|
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