Interface | Description |
---|---|
ProgressWatcher |
This interface is to use for tracking progress of a process.
|
Class | Description |
---|---|
AdjacencyMatrix |
Adjacency matrix representation of a graph.
|
Blacklist |
A blacklist is used for not using ubiquitous small molecules in patterns.
|
ChemicalNameNormalizer |
This class is used for finding a standard name for a small molecule.
|
DifferentialModificationUtil |
THis class is used for comparing modification features of two PhysicalEntity objects of same
EntityReference.
|
HGNC |
This class provides a mapping between HGNC IDs and Symbols.
|
PhysicalEntityChain |
This class takes two PhysicalEntity objects linked with generic or complex member relationships,
and prepares an array of PEs that link those.
|
Enum | Description |
---|---|
PhysicalEntityChain.Activity |
Values for activity.
|
RelType |
Distinguishes between input and output.
|
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