public class ControlsPhosphorylationMiner extends ControlsStateChangeOfMiner
blacklist, description, idFetcher, idMap, name, pattern
Constructor and Description |
---|
ControlsPhosphorylationMiner()
Constructor that sets the type.
|
Modifier and Type | Method and Description |
---|---|
Pattern |
constructPattern()
Constructs the pattern.
|
getMediatorLabels, getSourceLabel, getSourcePELabels, getTargetLabel, getTargetPELabels
getSIFType, setType, writeResult
concat, createSIFInteraction, fetchIDs, getCellularLocations, getChain, getCompoundName, getDeltaCompartments, getDeltaModifications, getDescription, getGeneSymbol, getGeneSymbol, getHeader, getIdentifiers, getIdMap, getModifications, getModifications, getModificationTerm, getName, getPattern, getPositionInString, getPositionStart, getRelationType, getUniprotNameForHuman, getUniprotNameForHuman, getValue, isInhibition, labeledInactive, removeCommon, setBlacklist, setDescription, setIDFetcher, setIdMap, setName, sign, sign, toString, toStringSet, writeResultAsSIF, writeResultDetailed, writeSIFsUsingSIFFramework
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
createSIFInteraction, setBlacklist, setIDFetcher
getDescription, getName, getPattern
public ControlsPhosphorylationMiner()
public Pattern constructPattern()
constructPattern
in class ControlsStateChangeOfMiner
Copyright © 2015 BioPAX. All rights reserved.