Package | Description |
---|---|
org.biopax.paxtools.impl.level3 |
This package contains the default implementation for BioPAX Level 3.
|
org.biopax.paxtools.model.level3 |
This package contains the interfaces that maps classes defined in the BioPAX Level 3 specification.
|
Modifier and Type | Class and Description |
---|---|
class |
DnaRegionReferenceImpl |
class |
NucleicAcidRegionReferenceImpl |
class |
RnaRegionReferenceImpl |
Modifier and Type | Method and Description |
---|---|
Set<NucleicAcidRegionReference> |
NucleicAcidReferenceImpl.getSubRegion() |
Modifier and Type | Method and Description |
---|---|
void |
NucleicAcidReferenceImpl.addSubRegion(NucleicAcidRegionReference regionReference) |
void |
NucleicAcidReferenceImpl.removeSubRegion(NucleicAcidRegionReference regionReference) |
Modifier and Type | Method and Description |
---|---|
protected void |
NucleicAcidReferenceImpl.setSubRegion(Set<NucleicAcidRegionReference> subRegion) |
Modifier and Type | Interface and Description |
---|---|
interface |
DnaRegionReference
Definition: A DNARegionReference is a grouping of several DNARegion entities that are common in sequence and
genomic position.
|
interface |
RnaRegionReference
A RNA region reference
|
Modifier and Type | Method and Description |
---|---|
Set<NucleicAcidRegionReference> |
NucleicAcidReference.getSubRegion() |
Modifier and Type | Method and Description |
---|---|
void |
NucleicAcidReference.addSubRegion(NucleicAcidRegionReference regionReference) |
void |
NucleicAcidReference.removeSubRegion(NucleicAcidRegionReference regionReference) |
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