public enum ChangeType extends Enum<ChangeType>
Enum Constant and Description |
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EXIST_TO_NOT_EXIST
A modification type was explicitly removed.
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EXIST_TO_UNKNOWN
A modification type "disappeared.
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NOT_EXIST_TO_EXIST
A modification type was explicitly added.
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NOT_EXIST_TO_UNKNOWN
A modification type that was known to be non-existing simply become unknown.
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UNCHANGED
No addition or removal.
|
UNKNOWN_TO_EXIST
The most common addition form - a modification type "appeared".
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UNKNOWN_TO_NOT_EXIST
A modification type "appeared" (Common addition type)
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Modifier and Type | Field and Description |
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static BindingFeature |
BINDING
Special static entity feature used as a 'hack' to capture complex membership.
|
static EntityFeature |
EXISTENCE
Special static entity feature used for representing changes that effect existence of protein -i.e.
|
Modifier and Type | Method and Description |
---|---|
static Map<EntityFeature,ChangeType> |
getDeltaFeatures(PhysicalEntity left,
PhysicalEntity right,
PhysicalEntity leftRoot,
PhysicalEntity rightRoot)
This method returns the features that are "changed" between the left and right physical entities.
|
static ChangeType |
valueOf(String name)
Returns the enum constant of this type with the specified name.
|
static ChangeType[] |
values()
Returns an array containing the constants of this enum type, in
the order they are declared.
|
public static final ChangeType EXIST_TO_NOT_EXIST
public static final ChangeType EXIST_TO_UNKNOWN
public static final ChangeType UNKNOWN_TO_NOT_EXIST
public static final ChangeType UNCHANGED
public static final ChangeType NOT_EXIST_TO_UNKNOWN
public static final ChangeType UNKNOWN_TO_EXIST
public static final ChangeType NOT_EXIST_TO_EXIST
public static final EntityFeature EXISTENCE
public static final BindingFeature BINDING
public static ChangeType[] values()
for (ChangeType c : ChangeType.values()) System.out.println(c);
public static ChangeType valueOf(String name)
name
- the name of the enum constant to be returned.IllegalArgumentException
- if this enum type has no constant with the specified nameNullPointerException
- if the argument is nullpublic static Map<EntityFeature,ChangeType> getDeltaFeatures(PhysicalEntity left, PhysicalEntity right, PhysicalEntity leftRoot, PhysicalEntity rightRoot)
left
- a simple physical entity to be compared.right
- a simple physical entity to be comparedleftRoot
- if left is in a complex or represented as a generic actual participating entity that contains
or subsumes left.rightRoot
- if right is in a complex or represented as a generic actual participating entity that contains
or subsumes right.Copyright © 2015 BioPAX. All rights reserved.