Package | Description |
---|---|
org.biopax.paxtools.pattern.constraint |
Package for constraints.
|
org.biopax.paxtools.pattern.miner |
Package for pattern miner utility.
|
Class and Description |
---|
IDFetcher |
Class and Description |
---|
AbstractSIFMiner
Base class for SIF Miners.
|
ConsumptionControlledByMiner
Miner for the consumption-controlled-by pattern.
|
ControlsExpressionMiner
Miner for the transcriptional regulation pattern.
|
ControlsStateChangeOfMiner
Miner for the controls-state-change pattern.
|
IDFetcher |
Miner
A miner provides a pattern to mine, and knows how to use the result set to prepare the text
output.
|
MinerAdapter
Adapter class for a miner.
|
OutputColumn.Type
Type of the output column.
|
SIFEnum
Enum for representing supported SIF edge types.
|
SIFInteraction |
SIFMiner
This interface tells that the miner supports SIF output.
|
SIFToText
An interface for converting a SIF interaction to text.
|
SIFType |
Copyright © 2015 BioPAX. All rights reserved.