public class ControlsTransportMiner extends ControlsStateChangeOfMiner
blacklist, description, idFetcher, idMap, name, pattern
Constructor and Description |
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ControlsTransportMiner()
Constructor that sets name and description.
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Modifier and Type | Method and Description |
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Pattern |
constructPattern()
Constructs the pattern.
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getMediatorLabels, getSourceLabel, getSourcePELabels, getTargetLabel, getTargetPELabels
getSIFType, setType, writeResult
concat, createSIFInteraction, fetchIDs, getCellularLocations, getChain, getCompoundName, getDeltaCompartments, getDeltaModifications, getDescription, getGeneSymbol, getGeneSymbol, getHeader, getIdentifiers, getIdMap, getModifications, getModifications, getModificationTerm, getName, getPattern, getPositionInString, getPositionStart, getRelationType, getUniprotNameForHuman, getUniprotNameForHuman, getValue, isInhibition, labeledInactive, removeCommon, setBlacklist, setDescription, setIDFetcher, setIdMap, setName, sign, sign, toString, toStringSet, writeResultAsSIF, writeResultDetailed, writeSIFsUsingSIFFramework
clone, equals, finalize, getClass, hashCode, notify, notifyAll, wait, wait, wait
createSIFInteraction, setBlacklist, setIDFetcher
getDescription, getName, getPattern
public ControlsTransportMiner()
public Pattern constructPattern()
constructPattern
in class ControlsStateChangeOfMiner
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