public class RelatedControl extends ConstraintAdapter
blacklist, size
Constructor and Description |
---|
RelatedControl(RelType peType)
Constructor with the relation type between PhysicalEntity and Conversion.
|
RelatedControl(RelType peType,
Blacklist blacklist)
Constructor with the relation type between PhysicalEntity and Conversion, and the blacklist.
|
Modifier and Type | Method and Description |
---|---|
boolean |
canGenerate()
This is a generative constraint.
|
Collection<BioPAXElement> |
generate(Match match,
int... ind)
According to the relation between PhysicalEntity and the Conversion, checks of the Control is
relevant.
|
assertIndLength, convertStepDirection, findDirectionInCatalysis, findDirectionInPathways, getCatalysisDirection, getControlChain, getConvParticipants, getDirection, getDirection, getDirection, getDirection, getVariableSize, satisfies, setSize
public RelatedControl(RelType peType)
peType
- relation type between PhysicalEntity and Conversionpublic RelatedControl(RelType peType, Blacklist blacklist)
peType
- relation type between PhysicalEntity and Conversionblacklist
- to detect ubiquitous small moleculespublic boolean canGenerate()
canGenerate
in interface Constraint
canGenerate
in class ConstraintAdapter
public Collection<BioPAXElement> generate(Match match, int... ind)
generate
in interface Constraint
generate
in class ConstraintAdapter
match
- current pattern matchind
- mapped indicesCopyright © 2015 BioPAX. All rights reserved.