Package | Description |
---|---|
org.biopax.paxtools.impl.level3 |
This package contains the default implementation for BioPAX Level 3.
|
org.biopax.paxtools.model.level3 |
This package contains the interfaces that maps classes defined in the BioPAX Level 3 specification.
|
Modifier and Type | Class and Description |
---|---|
class |
EvidenceImpl |
Modifier and Type | Method and Description |
---|---|
Set<Evidence> |
PathwayStepImpl.getEvidence() |
Set<Evidence> |
EntityReferenceImpl.getEvidence() |
Set<Evidence> |
EntityImpl.getEvidence() |
Set<Evidence> |
EntityFeatureImpl.getEvidence() |
Class<? extends Evidence> |
EvidenceImpl.getModelInterface() |
Modifier and Type | Method and Description |
---|---|
void |
PathwayStepImpl.addEvidence(Evidence evidence) |
void |
EntityReferenceImpl.addEvidence(Evidence evidence) |
void |
EntityImpl.addEvidence(Evidence newEvidence) |
void |
EntityFeatureImpl.addEvidence(Evidence evidence) |
void |
PathwayStepImpl.removeEvidence(Evidence evidence) |
void |
EntityReferenceImpl.removeEvidence(Evidence evidence) |
void |
EntityImpl.removeEvidence(Evidence oldEvidence) |
void |
EntityFeatureImpl.removeEvidence(Evidence evidence) |
Modifier and Type | Method and Description |
---|---|
void |
PathwayStepImpl.setEvidence(Set<Evidence> evidence) |
void |
EntityReferenceImpl.setEvidence(Set<Evidence> evidence) |
protected void |
EntityImpl.setEvidence(Set<Evidence> newEvidence) |
protected void |
EntityFeatureImpl.setEvidence(Set<Evidence> evidence) |
Modifier and Type | Method and Description |
---|---|
Set<Evidence> |
Observable.getEvidence() |
Modifier and Type | Method and Description |
---|---|
void |
Observable.addEvidence(Evidence newEvidence) |
void |
Observable.removeEvidence(Evidence oldEvidence) |
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