public interface BiochemicalReaction extends Conversion
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Modifier and Type | Method and Description |
---|---|
void |
addDeltaG(DeltaG deltaG)
Standard transformed Gibbs energy change for a reaction written in terms of biochemical
reactants (sums of species), delta-G'o.
|
void |
addDeltaH(float delta_h)
For biochemical reactions this property refers to the standard transformed enthalpy change for a reaction
written in terms of biochemical reactants (sums of species), delta-H'o.
|
void |
addDeltaS(float delta_s)
For biochemical reactions, this property refers to the standard transformed entropy change for a reaction
written in terms of biochemical reactants (sums of species), delta-S'o.
|
void |
addECNumber(String ec_number)
The unique number assigned to a reaction by the Enzyme Commission of the International Union of Biochemistry
and Molecular Biology.
|
void |
addKEQ(KPrime keq)
This quantity is dimensionless and is usually a single number.
|
Set<DeltaG> |
getDeltaG()
Standard transformed Gibbs energy change for a reaction written in terms of biochemical
reactants (sums of species), delta-G'o.
|
Set<Float> |
getDeltaH()
For biochemical reactions this property refers to the standard transformed enthalpy change for a reaction
written in terms of biochemical reactants (sums of species), delta-H'o.
|
Set<Float> |
getDeltaS()
For biochemical reactions, this property refers to the standard transformed entropy change for a reaction
written in terms of biochemical reactants (sums of species), delta-S'o.
|
Set<String> |
getECNumber()
The unique number assigned to a reaction by the Enzyme Commission of the International Union of Biochemistry
and Molecular Biology.
|
Set<KPrime> |
getKEQ()
This quantity is dimensionless and is usually a single number.
|
void |
removeDeltaG(DeltaG deltaG)
Standard transformed Gibbs energy change for a reaction written in terms of biochemical
reactants (sums of species), delta-G'o.
|
void |
removeDeltaH(float delta_h)
For biochemical reactions this property refers to the standard transformed enthalpy change for a reaction
written in terms of biochemical reactants (sums of species), delta-H'o.
|
void |
removeDeltaS(float delta_s)
For biochemical reactions, this property refers to the standard transformed entropy change for a reaction
written in terms of biochemical reactants (sums of species), delta-S'o.
|
void |
removeECNumber(String ec_number)
The unique number assigned to a reaction by the Enzyme Commission of the International Union of Biochemistry
and Molecular Biology.
|
void |
removeKEQ(KPrime keq)
This quantity is dimensionless and is usually a single number.
|
addLeft, addParticipantStoichiometry, addRight, getConversionDirection, getLeft, getParticipantStoichiometry, getRight, getSpontaneous, removeLeft, removeParticipantStoichiometry, removeRight, setConversionDirection, setSpontaneous
addInteractionType, addParticipant, getInteractionType, getParticipant, removeInteractionType, removeParticipant
getControlledOf, getPathwayComponentOf, getStepProcessOf
addAvailability, addDataSource, getAvailability, getDataSource, getParticipantOf, removeAvailability, removeDataSource
addEvidence, getEvidence, removeEvidence
addName, getDisplayName, getName, getStandardName, removeName, setDisplayName, setName, setStandardName
addXref, getXref, removeXref
addComment, getComment, removeComment
equivalenceCode, getAnnotations, getModelInterface, getRDFId, isEquivalent
Set<DeltaG> getDeltaG()
void addDeltaG(DeltaG deltaG)
deltaG
- to be added.void removeDeltaG(DeltaG deltaG)
deltaG
- to be removed.Set<Float> getDeltaH()
void addDeltaH(float delta_h)
delta_h
- standard transformed enthalpy changevoid removeDeltaH(float delta_h)
delta_h
- standard transformed enthalpy changeSet<Float> getDeltaS()
void addDeltaS(float delta_s)
delta_s
- valuevoid removeDeltaS(float delta_s)
delta_s
- valueSet<String> getECNumber()
void addECNumber(String ec_number)
ec_number
- The unique number assigned to a reaction by the Enzyme Commissionvoid removeECNumber(String ec_number)
ec_number
- The unique number assigned to a reaction by the Enzyme CommissionSet<KPrime> getKEQ()
void addKEQ(KPrime keq)
keq
- measured equilibrium constant for a biochemical reactionvoid removeKEQ(KPrime keq)
keq
- measured equilibrium constant for a biochemical reactionCopyright © 2015 BioPAX. All rights reserved.