The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:
GroupId | ArtifactId | Version | Type | License |
---|---|---|---|---|
com.sun.xml.bind | jaxb-impl | 2.1.3 | jar | - |
commons-logging | commons-logging | 1.1.1 | jar | The Apache Software License, Version 2.0 |
javax.xml.bind | jaxb-api | 2.1 | jar | - |
org.biopax.paxtools | paxtools-core | 4.3.1 | jar | LGPL 2.0 license |
psidev.psi.mi | psi25-xml | 1.8.4 | jar | The Apache Software License, Version 2.0 |
psidev.psi.mi | psimitab | 1.8.4 | jar | The Apache Software License, Version 2.0 |
The following is a list of runtime dependencies for this project. These dependencies are required to run the application:
GroupId | ArtifactId | Version | Type | License |
---|---|---|---|---|
log4j | log4j | 1.2.13 | jar | - |
The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:
GroupId | ArtifactId | Version | Type | License |
---|---|---|---|---|
junit | junit | 4.10 | jar | Common Public License Version 1.0 |
The following is a list of transitive dependencies for this project. Transitive dependencies are the dependencies of the project dependencies.
The following is a list of compile dependencies for this project. These dependencies are required to compile and run the application:
GroupId | ArtifactId | Version | Type | License |
---|---|---|---|---|
com.google.guava | guava | r09 | jar | The Apache Software License, Version 2.0 |
commons-lang | commons-lang | 2.6 | jar | The Apache Software License, Version 2.0 |
cpdetector | cpdetector | 1.0.7 | jar | - |
dom4j | dom4j | 1.6.1 | jar | - |
jargs | jargs | 1.0 | jar | - |
javax.activation | activation | 1.1 | jar | Common Development and Distribution License (CDDL) v1.0 |
javax.activation | com.springsource.javax.activation | 1.1.1 | jar | - |
javax.xml.stream | com.springsource.javax.xml.stream | 1.0.1 | jar | - |
javax.xml.stream | stax-api | 1.0-2 | jar | GNU General Public Library-COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0 |
jaxen | jaxen | 1.1-beta-8 | jar | - |
jdom | jdom | 1.0 | jar | - |
net.sf.saxon | saxon | 8.7 | jar | Mozilla Public License Version 1.0 |
net.sf.saxon | saxon-xom | 8.7 | jar | Mozilla Public License Version 1.0 |
net.sourceforge.collections | collections-generic | 4.01 | jar | Apache License V2.0 |
org.antlr | com.springsource.antlr | 2.7.7 | jar | - |
org.apache.commons | com.springsource.org.apache.commons.collections | 3.2.1 | jar | - |
org.apache.commons | com.springsource.org.apache.commons.io | 1.4.0 | jar | - |
org.apache.commons | com.springsource.org.apache.commons.lang | 2.4.0 | jar | - |
org.apache.commons | com.springsource.org.apache.commons.logging | 1.1.1 | jar | - |
org.apache.geronimo.specs | geronimo-activation_1.1_spec | 1.0.2 | jar | The Apache Software License, Version 2.0 |
org.apache.log4j | com.springsource.org.apache.log4j | 1.2.15 | jar | - |
org.apache.servicemix.bundles | org.apache.servicemix.bundles.jaxb-impl | 2.2.4_2 | jar | The Apache Software License, Version 2.0 |
org.apache.servicemix.specs | org.apache.servicemix.specs.jaxb-api-2.2 | 2.1.0 | jar | The Apache Software License, Version 2.0 |
org.apache.servicemix.specs | org.apache.servicemix.specs.stax-api-1.0 | 2.1.0 | jar | The Apache Software License, Version 2.0 |
org.mozilla.intl | chardet | 1.0 | jar | - |
psidev.psi.tools | xxindex | 0.11 | jar | The Apache Software License, Version 2.0 |
xalan | xalan | 2.7.0 | jar | - |
xerces | xmlParserAPIs | 2.6.2 | jar | - |
xml-apis | xml-apis | 1.0.b2 | jar | The Apache Software License, Version 2.0 |
xom | xom | 1.1 | jar | - |
The following is a list of test dependencies for this project. These dependencies are only required to compile and run unit tests for the application:
GroupId | ArtifactId | Version | Type | License |
---|---|---|---|---|
org.hamcrest | hamcrest-core | 1.1 | jar | BSD style |
BSD style: Hamcrest Core
GNU General Public Library: Streaming API for XML
Unknown: Log4j, chardet, com.springsource.antlr, com.springsource.javax.activation, com.springsource.javax.xml.stream, com.springsource.org.apache.commons.collections, com.springsource.org.apache.commons.io, com.springsource.org.apache.commons.lang, com.springsource.org.apache.commons.logging, com.springsource.org.apache.log4j, cpdetector, dom4j, jargs, jaxb-api, jaxb-impl, jaxen, jdom, xalan, xmlParserAPIs, xom
LGPL 2.0 license: PSI-MI/MITAB to BioPAX Converter, Paxtools Core (BioPAX object model, I/O API, implementation and extras)
COMMON DEVELOPMENT AND DISTRIBUTION LICENSE (CDDL) Version 1.0: Streaming API for XML
Common Development and Distribution License (CDDL) v1.0: JavaBeans Activation Framework (JAF)
Mozilla Public License Version 1.0: Saxon, Saxon XOM
Apache License V2.0: larvalabs collections
The Apache Software License, Version 2.0: Activation 1.1, Apache ServiceMix :: Bundles :: jaxb-impl, Apache ServiceMix :: Specs :: JAXB API 2.2, Apache ServiceMix :: Specs :: Stax API 1.0, Commons Lang, Commons Logging, Guava (Google Common Libraries), PSI :: PSI-MI TABular format tools, PSI :: PSI-MI XML 2.5 Library, PSI :: Tools :: Xml XPath Indexer, XML Commons External Components XML APIs
Common Public License Version 1.0: JUnit