org.biopax.paxtools.search

Interface Searcher

All Known Implementing Classes:

SearchEngine

public interface Searcher

Method Summary

Modifier and Type	Method and Description
SearchResult	search(String query, int page, Class<? extends BioPAXElement> filterByType, String[] datasources, String[] organisms) Full-text search for BioPAX elements.

Method Detail

search

SearchResult search(String query,
                    int page,
                    Class<? extends BioPAXElement> filterByType,
                    String[] datasources,
                    String[] organisms)

Full-text search for BioPAX elements.

Parameters:

query - String (keywords or Lucene query string)

page - hits page number (when the number of hits exceeds a threshold)

filterByType - - class filter

datasources - - filter by datasource

organisms - - filter by organism

Returns:

a bean that contains the list of BioPAX objects (hits) and annotations.