public interface entity extends Level2Element, XReferrable, InteractionParticipant
UNKNOWN_DOUBLE, UNKNOWN_FLOAT, UNKNOWN_INT
Modifier and Type | Method and Description |
---|---|
void |
addAVAILABILITY(String AVAILABILITY_TEXT)
This method adds the given text to the avaialability set.
|
void |
addDATA_SOURCE(dataSource DATA_SOURCE_INST)
This method adds the given value to the DATA_SOURCE set.
|
void |
addSYNONYMS(String SYNONYMS_TEXT)
This method adds the given value to the SYNONYMS set.
|
Set<String> |
getAVAILABILITY()
The contents of this set can be modified but semantic consistency is not
guaranteed.
|
Set<dataSource> |
getDATA_SOURCE()
This method returns a set of free text descriptions of the source of this
data, e.g.
|
String |
getNAME()
This method returns the preferred full name for this entity.
|
String |
getSHORT_NAME()
This method sets an abbreviated name for this entity, preferably a name that
is short enough to be used in a visualization application to label a
graphical element that represents this entity.
|
Set<String> |
getSYNONYMS()
The contents of this set can be modified but semantic consistency is not
guaranteed.
|
void |
removeAVAILABILITY(String AVAILABILITY_TEXT)
This method removes the given text from the avaialability set.
|
void |
removeDATA_SOURCE(dataSource DATA_SOURCE_INST)
This method removes the given value from the DATA_SOURCE set.
|
void |
removeSYNONYMS(String SYNONYMS_TEXT)
This method removes the given value from the SYNONYMS set.
|
void |
setAVAILABILITY(Set<String> AVAILABILITY_TEXT)
This method overrides existing set with the new set.
|
void |
setDATA_SOURCE(Set<dataSource> DATA_SOURCE)
This method overrides existing set with the new set.
|
void |
setNAME(String NAME)
This method sets the preferred full name for this entity to the given
value.
|
void |
setSHORT_NAME(String SHORT_NAME)
An abbreviated name for this entity, preferably a name that is short enough
to be used in a visualization application to label a graphical element that
represents this entity.
|
void |
setSYNONYMS(Set<String> SYNONYMS)
This method overrides existing set with the new set.
|
addXREF, findCommonPublications, findCommonRelationships, findCommonUnifications, getXREF, removeXREF, setXREF
isPARTICIPANTSof
addCOMMENT, getCOMMENT, removeCOMMENT, setCOMMENT
equivalenceCode, getAnnotations, getModelInterface, getRDFId, isEquivalent
void addAVAILABILITY(String AVAILABILITY_TEXT)
AVAILABILITY_TEXT
- a string describing the availability of this data
(e.g. a copyright statement).void addDATA_SOURCE(dataSource DATA_SOURCE_INST)
DATA_SOURCE_INST
- a free text description of the source of this data,
e.g. a database or person name.void addSYNONYMS(String SYNONYMS_TEXT)
SYNONYMS_TEXT
- a new name to be addedSet<String> getAVAILABILITY()
addAVAILABILITY(String)
and removeAVAILABILITY(String)
is recommended.Set<dataSource> getDATA_SOURCE()
addDATA_SOURCE(org.biopax.paxtools.model.level2.dataSource)
and removeDATA_SOURCE(org.biopax.paxtools.model.level2.dataSource)
is
recommended.String getNAME()
String getSHORT_NAME()
Set<String> getSYNONYMS()
addSYNONYMS(java.lang.String)
and removeSYNONYMS(java.lang.String)
is
recommended.void removeAVAILABILITY(String AVAILABILITY_TEXT)
AVAILABILITY_TEXT
- a string describing the availability of this data
(e.g. a copyright statement).void removeDATA_SOURCE(dataSource DATA_SOURCE_INST)
DATA_SOURCE_INST
- a free text description of the source of this data,
e.g. a database or person name.void removeSYNONYMS(String SYNONYMS_TEXT)
SYNONYMS_TEXT
- a new name to be addedvoid setAVAILABILITY(Set<String> AVAILABILITY_TEXT)
addAVAILABILITY(java.lang.String)
instead.AVAILABILITY_TEXT
- a set of strings describing the availability of
this data (e.g. a copyright statement).void setDATA_SOURCE(Set<dataSource> DATA_SOURCE)
addDATA_SOURCE(org.biopax.paxtools.model.level2.dataSource)
instead.DATA_SOURCE
- a set of free text descriptions of the source of this
data, e.g. a database or person name.void setNAME(String NAME)
NAME
- The preferred full name for this entity.void setSHORT_NAME(String SHORT_NAME)
SHORT_NAME
- new short namevoid setSYNONYMS(Set<String> SYNONYMS)
addSYNONYMS(java.lang.String)
instead.SYNONYMS
- a set of names for this entity.Copyright © 2015 BioPAX. All rights reserved.